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AGI & CoCoSci

837 items from yuzheshi/awesome-agi-cocosci ★398

  1. How young children integrate information sources to infer the meaning of words nature.com

    Nature Human Behavior, 2021. [All Versions]. Before formal education begins, children typically acquire a vocabulary of thousands of words. This learning process requires the use of many different information sources in their social environment, including their current state of…

  2. Rational quantitative attribution of beliefs, desires and percepts in human mentalizing nature.com

    Nature Human Behavior, 2017. [All Versions]. [Preprint]. This paper presents a model of core mentalizing computations: inferring jointly an actor’s beliefs, desires and percepts from how they move in the local spatial environment. The proposed Bayesian theory of mind (BToM)…

  3. A manifesto for reproducible science nature.com

    Nature Human Behavior, 2017. [All Versions].

  4. Bridging the information gap in organic chemical reactions nature.com

    Nature Chemistry, 2024. [All Versions]. This perspective article formulates eight principles to improve data management in scientific publications relating to data standardization, reproducibility and evaluation, and encourage scientists to go beyond current publication…

  5. An autonomous portable platform for universal chemical synthesis nature.com

    Nature Chemistry, 2022. [All Versions]. [Preprint]. This paper presents a portable suitcase-sized chemical synthesis platform containing all the modules required for synthesis and purification. The system uses a chemical programming language coupled to a digital reactor…

  6. Convergence of multiple synthetic paradigms in a universally programmable chemical synthesis machine nature.com

    Nature Chemistry, 2020. [All Versions]. [Preprint]. Although the automatic synthesis of molecules has been established, each reaction class uses bespoke hardware. This means that the connection of multi-step syntheses in a single machine to run many different protocols and…

  7. Active learning accelerates electrolyte solvent screening for anode-free lithium metal batteries nature.com

    Nature Communications, 2025. [All Versions]. Anode-free or ‘zero-excess’ lithium metal batteries offer high energy density compared to current lithium-ion batteries but require electrolyte innovation to extend cycle life. Due to the lack of universal design principles…

  8. DrBioRight 2.0: an LLM-powered bioinformatics chatbot for large-scale cancer functional proteomics analysis nature.com

    Nature Communications, 2025. [All Versions]. [Project]. Functional proteomics provides critical insights into cancer mechanisms, facilitating the discovery of novel biomarkers and therapeutic targets. The authors have developed a comprehensive cancer functional proteomics…

  9. OCTOPUS: operation control system for task optimization and job parallelization via a user-optimal scheduler nature.com

    Nature Communications, 2024. [All Versions]. The material acceleration platform, empowered by robotics and artificial intelligence, is a transformative approach for expediting material discovery processes across diverse domains. However, the development of an operating system…

  10. Symbolic metaprogram search improves learning efficiency and explains rule learning in humans nature.com

    Nature Communications, 2024. [All Versions]. Symbolic models based on program learning successfully explain rule-learning in many domains, but performance degrades quickly as program complexity increases. It remains unclear how to scale symbolic rule-learning methods to model…

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  11. PatCID: an open-access dataset of chemical structures in patent documents nature.com

    Nature Communications, 2024. [All Versions]. The automatic analysis of patent publications has potential to accelerate research across various domains, including drug discovery and material science. Within patent documents, crucial information often resides in visual depictions…

  12. A human-machine interface for automatic exploration of chemical reaction networks nature.com

    Nature Communications, 2024. [All Versions]. Autonomous reaction network exploration algorithms offer a systematic approach to explore mechanisms of complex chemical processes. However, the resulting reaction networks are so vast that an exploration of all potentially…

  13. Structured information extraction from scientific text with large language models nature.com

    Nature Communications, 2024. [All Versions]. This paper presents a simple approach to joint named entity recognition and relation extraction and demonstrate how pretrained large language models can be fine-tuned to extract useful records of complex scientific knowledge. The…

  14. An integrated self-optimizing programmable chemical synthesis and reaction engine nature.com

    Nature Communications, 2024. [All Versions]. Robotic platforms for chemistry are developing rapidly but most systems are not currently able to adapt to changing circumstances in real-time. This paper presents a dynamically programmable system capable of making, optimizing, and…

  15. A dynamic knowledge graph approach to distributed self-driving laboratories nature.com

    Nature Communications, 2024. [All Versions]. This work employs ontologies to capture data and material flows in design-make-test-analyse cycles, utilising autonomous agents as executable knowledge components to carry out the experimentation workflow. Data provenance is recorded…

  16. Language models and protocol standardization guidelines for accelerating synthesis planning in heterogeneous catalysis nature.com

    Nature Communications, 2023. [All Versions]. This paper introduces a transformer model for automated synthesis protocol analysis in catalyst discovery, exemplified using single-atom heterogeneous catalysts (SACs), a rapidly expanding catalyst family. The model adeptly converts…

  17. Artificial intelligence driven design of catalysts and materials for ring opening polymerization using a… nature.com

    Nature Communications, 2023. [All Versions]. [Project]. Advances in machine learning (ML) and automated experimentation are poised to vastly accelerate research in polymer science. Data representation is a critical aspect for enabling ML integration in research workflows, yet…

  18. Retrosynthesis prediction using an end-to-end graph generative architecture for molecular graph editing nature.com

    Nature Communications, 2023. [All Versions]. Retrosynthesis planning, the process of identifying a set of available reactions to synthesize the target molecules, remains a major challenge in organic synthesis. Recently, computer-aided synthesis planning has gained renewed…

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  19. AlphaFlow: autonomous discovery and optimization of multi-step chemistry using a self-driven fluidic lab guided by… nature.com

    Nature Communications, 2023. [All Versions]. Closed-loop, autonomous experimentation enables accelerated and material-efficient exploration of large reaction spaces without the need for user intervention. However, autonomous exploration of advanced materials with complex…

  20. Synthesizing theories of human language with Bayesian program induction nature.com

    Nature Communications, 2022. [All Versions]. Automated, data-driven construction and evaluation of scientific models and theories is a long-standing challenge in artificial intelligence. This work presents a framework for algorithmically synthesizing models of a basic part of…

  21. Inferring experimental procedures from text-based representations of chemical reactions nature.com

    Nature Communications, 2021. [All Versions]. This paper presents data-driven models for predicting the entire sequence of synthesis steps starting from a textual representation of a chemical equation, for application in batch organic chemistry.

  22. Single-atom alloy catalysts designed by first-principles calculations and artificial intelligence nature.com

    Nature Communications, 2021. [All Versions]. This paper addresses the problem of new Single-atom-alloy catalysts (SAACs) discovery by applying a compressed-sensing data-analytics approach parameterized with density-functional inputs.

  23. Automated extraction of chemical synthesis actions from experimental procedures nature.com

    Nature Communications, 2020. [All Versions]. This paper presents a method to convert unstructured experimental procedures written in English to structured synthetic steps (action sequences) reflecting all the operations needed to successfully conduct the corresponding chemical…

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  24. Virtual reality in behavioral neuroscience and beyond nature.com

    Nature Neuroscience, 2002. [All Versions]. A classic review on the early applications of Virtual Reality to behavioral studies.

  25. The BioPAX community standard for pathway data sharing nature.com

    Nature Biotechnology, 2010. [All Versions]. [Preprint]. Biological Pathway Exchange (BioPAX) is a standard language to represent biological pathways at the molecular and cellular level and to facilitate the exchange of pathway data. BioPAX can represent metabolic and signaling…

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  26. Natural speech reveals the semantic maps that tile human cerebral cortex nature.com

    Nature, 2016. [All Versions]. [Preprint]. [Code & Tutorial]. The meaning of language is represented in regions of the cerebral cortex collectively known as the ‘semantic system’. However, little of the semantic system has been mapped comprehensively, and the semantic…

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  27. Probabilistic machine learning and artificial intelligence nature.com

    Nature, 2015. [All Versions]. Probabilistic modelling provides a framework for understanding what learning is, and has therefore emerged as one of the principal theoretical and practical approaches for designing machines that learn from data acquired through experience. The…

  28. Functional genomic hypothesis generation and experimentation by a robot scientist nature.com

    Nature, 2004. [All Versions]. This paper describes a physically implemented robotic system that applies techniques from artificial intelligence to carry out cycles of scientific experimentation. The system automatically originates hypotheses to explain observations, devises…

  29. Five keys to writing a reproducible lab protocol nature.com

    Nature, 2021. [All Versions]. This interviewing paper introduces five ways to increase the reproducibility of experimental protocols: (i) documenting protocols as the experiment goes; (ii) providing video illustrations in addition to written protocols; (iii) using electronic…

  30. The Internet of Things comes to the lab nature.com

    Nature, 2017. [All Versions]. The emergence of connected instruments and equipment promises to untether researchers from the laboratory --- letting them fine-tune experiments and analyse data remotely.

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  31. 1,500 scientists lift the lid on reproducibility nature.com

    Nature, 2016. [All Versions].

  32. With or Without U? The Appropriate Test for a U-Shaped Relationship mpra.ub.uni-muenchen.de

    Oxford Bulletin of Economics and Statistics, 2010. [All Versions]. The original method for testing U-shape relation from the data, which is distinctive from the quadratic regression test.

  33. Infinite Latent Feature Models and the Indian Buffet Process mlg.eng.cam.ac.uk

    Gatsby Computational Neuroscience Unit Technical Report 2005-001, 2005. [All Versions].

  34. Program Synthesis microsoft.com

    Foundations and Trends in Programming Languages, 2017. [All Versions]. Sumit Gulwani's comprehensive review on program synthesis.

  35. cite2vec: Citation-Driven Document Exploration via Word Embeddings matthewberger.github.io

    IEEE Transactions on Visualization and Computer Graphics, 2016. [All Versions].

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  36. Finitely Generated Groups and First-Order Logic londmathsoc.onlinelibrary.wiley.com

    Journal of The London Mathematical Society-second Series, 2005. [All Versions].

  37. People Infer Recursive Visual Concepts from Just a Few Examples link.springer.com

    Computational Brain & Behavior, 2020. [All Versions].

  38. Abduction and styles of scientific thinking link.springer.com

    Synthese, 2021. [All Versions]. A computational philosophy account connecting Abduction and scientific thinking.

  39. The Principle of Semantic Compositionality link.springer.com

    Topoi, 1994. [All Versions]. The original paper on the principle of semantic compositionality.

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  40. What is Answer Set Programming? link.springer.com

    Springer, 2008. [All Versions]. [Tutorial on AAAI]. Answer set programming (ASP) is a form of declarative programming oriented towards difficult search problems. As an outgrowth of research on the use of nonmonotonic reasoning in knowledge representation, it is particularly…

  41. An introduction to Kolmogorov complexity and its applications link.springer.com

    Springer, 2008. [All Versions]. The introductory book for Algorithmic Information Theory, especially the Kolmogorov complexity theory.

  42. Abstract Hardware Grounding Towards the Automated Design of Automation Systems link.springer.com

    ICIRA'24, 2024. [All Versions]. [Preprint]. Crafting automation systems tailored for specific domains requires aligning the space of human experts’ semantics with the space of robot executable actions, and scheduling the required resources and system layout accordingly…

  43. Symbolic data analysis: what is it? link.springer.com

    Proceedings in Computational Statistics, 2006. [All Versions].

  44. Regression Analysis for Interval-Valued Data link.springer.com

    Data Analysis, Classification, and Related Methods, 2000. [All Versions]. The original paper on symbolic regression.

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  45. A Relational Approach to Tool-Use Learning in Robots link.springer.com

    ILP'12, 2012. [All Versions].

  46. Domain-Specific Modeling Languages: Requirements Analysis and Design Guidelines link.springer.com

    Domain Engineering: Product Lines, Languages, and Conceptual Models, 2013. [All Versions]. In recent years, the development of domain-specific modeling languages has gained remarkable attention. This is for good reasons. A domain-specific modeling language incorporates concepts…

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