Biomedical Informatics on the Cloud: A Treasure Hunt for Advancing Cardiovascular Medicine
An overview of how BioIE and bioinformatics workflows can be applied to questions in cardiovascular health and medicine research.
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- 2026-10-10
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BioC-BioGRID bioc.sourceforge.net
paper - 120 full text articles annotated for PPI and genetic interactions. Used in the BioCreative V BioC task.
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Clinical information extraction applications: A literature review sciencedirect.com
A review of clinical IE papers published as of September 2016. From Mayo Clinic group (see below).
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Columbia University Department of Biomedical Informatics dbmi.columbia.edu
Led by Drs. George Hripcsak and Noémie Elhadad.
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Brown Center for Biomedical Informatics brown.edu
Based at Brown University and directed by Dr. Neil Sarkar, whose research group works on topics in clinical NLP and IE.
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Mayo Clinic's clinical natural language processing program mayo.edu
Several groups at Mayo Clinic have made major contributions to BioIE (for example, the Apache cTAKES platform) over the past 20 years.
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