Neuroimaging
91 items from npacore/awesome-neuroimaging ★51
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afni_proc.py afni.nimh.nih.gov
Best practice pipelines with pre-configured blocks using AFNI.
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Dimon afni.nimh.nih.gov
Monitor real-time acquisition of DICOM image files with AFNI.
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3dcalc afni.nimh.nih.gov
Voxel-by-voxel arithmetic on 1D to 4D datasets. From AFNI.
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3dSkullStrip afni.nimh.nih.gov
AFNI's skull stripping utility with many parameters.
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3dQwarp afni.nimh.nih.gov
OpenMP parallelized AFNI tool to compute a nonlinearly warped version of source dataset to match a base dataset.
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3dNotes afni.nimh.nih.gov
A program to add, delete and show notes for AFNI datasets.
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3dDeconvolve afni.nimh.nih.gov
AFNI - Program to calculate the deconvolution of a measurement 3D+time dataset with a specified input stimulus time series. This program can also perform multiple linear regression using multiple input stimulus time series.
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AFNI afni.nimh.nih.gov
Volumetric viewer from the AFNI suit. GUI's aesthetic defined by the '90s era Motif toolkit.
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AFNI afni.nimh.nih.gov
Analysis of Functional NeuroImages is a leading software suite of C, Python, R programs and shell scripts primarily developed for the analysis and display of multiple MRI modalities.
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ABCD abcdstudy.org
Long-term Adolescent Brain Cognitive Development study including 1000s of longitudinal MRI scans.
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hurst github.com
Algorithm to assess intrinsic excitation-inhibition imbalance in MR (Trakoshis et al, eLife, 2020).
