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Health and Social Science

1,076 items in 12 lists

  1. Monty github.com

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  2. NEURON github.com

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  3. Huang et al ClinicalBERT github.com

    paper

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  4. medaCy github.com

    A system for building predictive medical natural language processing models. Built on the spaCy framework.

  5. Brainbrowser github.com

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  6. AllenSDK github.com

  7. Neo github.com

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  8. gephi gephi.org

    Leading visualization and exploration software for all kinds of graphs and networks.

  9. Brayns github.com

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  10. Resources For Allies github.com

    By Lara Hogan.

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  11. heudiconv github.com

    A flexible DICOM converter for organizing brain imaging data into structured directory layouts.

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  12. Nitime github.com

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  13. Elephant github.com

  14. Anafora github.com

    paper - An annotation tool with adjudication and progress tracking features.

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  15. Stylo github.com

    R package for stylometric analyses.

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  16. PyNWB github.com

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  17. rentrez github.com

    R utilities for accessing NCBI resources, including PubMed.

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  18. brainGraph github.com

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  19. CORD-19 github.com

    A corpus of scholarly manuscripts concerning COVID-19. Articles are primarily from PubMed Central and preprint servers, though the set also includes metadata on papers without full-text availability.

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  20. Dreamento github.com

    DReam ENgenieering TOolbox is Python-based program for dream engineering while monitoring/analyzing real-time EEG data.

  21. expyriment github.com

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  22. HALFpipe github.com

    User-friendly software that facilitates reproducible analysis of fMRI data.

  23. JS Bookmarklet Simulating Colorblindness github.com

    This is a JS bookmarklet that takes any page and simulates what is like to navigate with colorblindness.

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  24. Osprey github.com

    An all-in-one software suite for state-of-the art processing and quantitative analysis of in-vivo magnetic resonance spectroscopy (MRS) data.

  25. SemEHR github.com

    paper - an IE infrastructure for electronic health records (EHR). Built on the CogStack project.

  26. CRAFT github.com

    paper - 67 full-text biomedical articles annotated in a variety of ways, including for concepts and coreferences. Now on version 5, including annotations linking concepts to the MONDO disease ontology.

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  27. IntellyWeave github.com

    Open-source platform for humanities research featuring AI-powered entity extraction (persons, organizations, locations, dates, events), semantic search across document collections, geospatial visualization for historical events, and archive research agents with 30+ curated…

  28. II-Commons github.com

    Daily-updated skill and CLI for deterministic retrieval across arXiv, PubMed/PMC, and supported US policy corpora.

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  29. GoodForPoc github.com

    List of inclusive companies for people of color in tech.

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  30. imagemagick imagemagick.org

    Image conversion tool.

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  31. Timeline timeline.knightlab.com

    Easy-to-make, beautiful timelines.

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  32. raw rawgraphs.io

    Open source, web-based tool for the visualization of complex data.

  33. bids-validator github.com

    Validator for the Brain Imaging Data Structure.

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  34. imtool3D_td github.com

    3D Image Viewer with ROI tools for Matlab (NIFTI viewer, Manual segmentation).

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  35. Pubrunner github.com

    A framework for running text mining tools on the newest set(s) of documents from PubMed.

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  36. TabInOut github.com

    paper - a framework for IE from tables in the literature.

  37. Online Neuroimaging Resources github.com

    A laundry list of online resources for MRI, fMRI, EEG, MEG.

  38. PyNoetic github.com

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  39. DeepPhe github.com

    A system for processing documents describing cancer presentations. Based on cTAKES (see above).

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  40. DAX github.com

    Distributed Automation for XNAT: use containerization w/YAML defined input/output.

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  41. SORTED github.com

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  42. lucidsourcekit github.com

    An all-you-need toolkit for lucid dreaming including a binaural beats player and much more.

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  43. Lightened Dream github.com

    A dream journal designed for lucid dreamers.

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  44. Dream Journal App github.com

    A Dream Journal that uses Google Drive.

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  45. lcmodel github.com

    Implements linear-combination modeling of magnetic resonance spectroscopy data.

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  46. mrQA github.com

    Tools for quality assurance in medical imaging datasets, including protocol compliance.

  47. Bio-SCoRes github.com

    paper - A framework for biomedical coreference resolution.

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