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montilab.psych.ucla.edusite

Shell script to combine afni and fsl tools for more robust skull stripping in patient populations.

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Neuroimaging
added
2026-10-10
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similar

  1. 3dSkullStrip afni.nimh.nih.gov

    AFNI's skull stripping utility with many parameters.

  2. bet fsl.fmrib.ox.ac.uk

    FSL's brain extraction tool.

  3. ROBEX nitrc.org

    Robust Brain Extraction without parameter tweaking.

  4. AFNI afni.nimh.nih.gov

    Analysis of Functional NeuroImages is a leading software suite of C, Python, R programs and shell scripts primarily developed for the analysis and display of multiple MRI modalities.

  5. BoneJ github.com

    Collection of Fiji/ImageJ plug-ins for skeletal biology.

  6. TrailMap github.com

    Software package to extract axonal data from cleared brains.

Neuroimaging › Imaging Tools > Skullstripping: “Shell script to combine afni and fsl tools for more robust skull stripping in patient populations.”