HCP Pipeline
Pipeline scripts implement the Minimal Preprocessing Pipeline (MPP) described in Glasser et al. 2013.
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- Neuroimaging
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- 2026-10-10
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clpipe clpipe.readthedocs.io
Uses fmriprep for preprocessing fMRI data and implements a variety of additional processing steps important for functional connectivity analyses such as nuisance regression and filtering.
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hmpl-language/hmpl github.com
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XCP-D xcp-d.readthedocs.io
Post-processing and noise regression pipeline picks up right where fMRIprep ends.
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Chem-PerturBridge github.com
Harmonized compendium and processing pipelines for small-molecule perturbation transcriptomics across heterogeneous assays and gene panels.
Neuroimaging › Pipelines > BOLD: “Pipeline scripts implement the Minimal Preprocessing Pipeline (MPP) described in Glasser et al. 2013.”