Evo
Long-context genomic foundation model (up to 1M tokens).
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- Computational Biology
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- 2026-10-10
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Evo 2 github.com
Genome foundation model trained on 9 trillion DNA base pairs across all domains of life with a 1M-token context window and single-nucleotide resolution.
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HyenaDNA github.com
Long-range genomic foundation model handling sequences up to 1M tokens with sub-quadratic attention.
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AlphaGenome github.com
Long-context DNA model predicting multimodal regulatory outputs including expression, splicing, chromatin features, and contact maps at near base-pair resolution.
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modernGENA github.com
ModernBERT-style DNA foundation-model family pretrained on hundreds of vertebrate genome assemblies for efficient long-sequence regulatory modeling.
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scFoundation github.com
Large-scale foundation model for single-cell gene expression, enabling multiple downstream tasks.
Computational Biology › Machine Learning Tasks and Models > Foundation Models > Genomics Foundation Models: “Long-context genomic foundation model (up to 1M tokens).”