Miscellaneous
17,336 items in 132 lists
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Atua atua.app
macOS app to use ChatGPT in any app. ($)
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Petey apps.apple.com
Native iOS and watchOS app. ($)
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Developer Duck apps.apple.com
Native developer-focused macOS app with Xcode plugin and command line support. ($)
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Short Circuit apps.apple.com
Native iOS and macOS app with support for Siri, Shortcuts, and more. ($)
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TorchIO torchio.readthedocs.io
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TomoBank tomobank.readthedocs.io
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sphinx-needs sphinx-needs.readthedocs.io
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sphinx-immaterial sphinx-immaterial.readthedocs.io
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setuptools setuptools.pypa.io
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nbsphinx nbsphinx.readthedocs.io
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msticpy msticpy.readthedocs.io
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Uberspace manual.uberspace.de
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jupyter-book jupyterbook.org
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jupyter-tutorial jupyter-tutorial.readthedocs.io
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jupyter-sphinx jupyter-sphinx.readthedocs.io
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Weblate docs.weblate.org
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Wagtail docs.wagtail.org
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SunPy docs.sunpy.org
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Sidra Data Platform docs.sidra.dev
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Scrapy docs.scrapy.org
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Ray docs.ray.io
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poliastro docs.poliastro.space
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Nautobot docs.nautobot.com
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The Haskell Tool Stack docs.haskellstack.org
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django-cms docs.django-cms.org
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doc2dash doc2dash.readthedocs.io
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discord.py discordpy.readthedocs.io
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Crest Ocean System crest.readthedocs.io
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CrateDB crate.io
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Argo CD argo-cd.readthedocs.io
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AiiDA demonstration aiida-qe-demo.readthedocs.io
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ZINC ligand discovery database zinc.docking.org
Free database of commercially-available compounds for virtual screening.
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WikiPathways wikipathways.org
Database of biological pathways.
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UniRef uniprot.org
Non-redundant sequence database clustering UniProtKB entries at multiple sequence identity thresholds.
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UniProt REST API uniprot.org
Programmatic access to protein sequence and functional annotation data.
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UniProt uniprot.org
Functional information on proteins.
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Uniclust uniclust.mmseqs.com
Clustered protein sequence databases.
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Tox21 tripod.nih.gov
12,707 compounds tested in 12 nuclear receptor and stress-response pathway biochemical assays for toxicity prediction.
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BioGRID thebiogrid.org
Protein, genetic, and chemical interactions.
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ClinTox tdcommons.ai
Clinical toxicity dataset contrasting FDA-approved drugs with those that failed clinical trials due to toxicity.
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Therapeutics Data Commons (TDC) tdcommons.ai
Unified benchmark suite covering ADMET, drug-target interaction, drug response, and more.
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Tabula Sapiens tabula-sapiens-portal.ds.czbiohub.org
Comprehensive human single-cell atlas of ~500K cells from 24 organs and tissues across multiple donors.
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Tabula Muris tabula-muris.ds.czbiohub.org
Comprehensive single-cell atlas of 20 mouse organs and tissues, enabling cross-tissue and cross-species comparisons.
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STRING string-db.org
PPI networks for multiple organisms.
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STITCH stitch.embl.de
Chemical-protein interactions.
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Davis kinase inhibitors DB staff.cs.utu.fi
Experimental kinase inhibitor binding affinity dataset for protein–ligand interaction research.
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Squidpy squidpy.readthedocs.io
Python library for spatial single-cell analysis.
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SNAP snap.stanford.edu
Dataset of drug-gene interactions.
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Cancer Cell Line Encyclopedia sites.broadinstitute.org
Database of ~1000 cancer cell lines.
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Frangieh et al. 2021 Perturb-CITE-seq singlecell.broadinstitute.org
Multimodal CRISPR knockout screen with RNA and surface-protein readouts in patient-derived melanoma models under immune-related conditions.
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