Miscellaneous
17,439 items in 132 lists
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DISEASES diseases.jensenlab.org
Gene–disease association database integrating evidence from text mining, curated databases, and experimental data.
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CellMiner Cross Database (CellMinerCDB) discover.nci.nih.gov
Integrates multiple cancer cell line databases.
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DGIdb dgidb.org
Drug-gene interactions and the druggable genome.
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PRISM depmap.org
Cancer drug sensitivity profiling of >4,500 drugs across >900 cancer cell lines using pooled-cell-line barcoding.
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Dependency Map (DepMap) depmap.org
CRISPR-Cas9 screens in cancer cell lines.
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DeepSEA deepsea.princeton.edu
Deep learning framework for predicting chromatin effects of sequence alterations with single-nucleotide sensitivity across thousands of chromatin features.
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Monocle3 cole-trapnell-lab.github.io
Single-cell trajectory analysis tool for learning developmental trajectories and ordering cells in pseudotime.
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ClinicalTrials.gov API clinicaltrials.gov
API for querying clinical trial metadata and results.
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ClinicalTrials.gov clinicaltrials.gov
Privately and publicly funded clinical studies.
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ChemSpider chemspider.com
Chemical structure database.
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CZ CELLxGENE cellxgene.cziscience.com
Single-cell dataset repository and interactive explorer from the Chan Zuckerberg Initiative.
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HIPPIE cbdm-01.zdv.uni-mainz.de
Human protein-protein interaction database.
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CATH database cathdb.info
Hierarchical classification of protein domain structures.
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Genomics of Drug Sensitivity in Cancer (GDSC) cancerrxgene.org
Drug sensitivity for ~1000 human cancer cell lines and hundreds of compounds.
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Catalogue Of Somatic Mutations In Cancer (COSMIC) cancer.sanger.ac.uk
Resource on somatic mutations in cancers.
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The Cancer Genome Atlas (TCGA) cancer.gov
Comprehensive multi-omics (genomics, transcriptomics, proteomics, methylation) dataset for 33 cancer types across ~11,000 patients.
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BEAT AML biodev.github.io
Functional ex vivo drug sensitivity measurements paired with genomics for acute myeloid leukemia.
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BioCyc biocyc.org
Collection of pathway/genome databases across thousands of organisms.
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BindingDB bindingdb.org
Compounds and target database.
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BindingDB Curated Sets bindingdb.org
Curated binding affinity datasets for protein–ligand interaction benchmarking.
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Bison arxiv.org
Cross-dataset model for globally unseen-compound response prediction using a shared gene representation, discrete diffusion models, and matched drug-contrast supervision.
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PerturbRx arxiv.org
Treatment-conditioned representation learning framework that transfers drug-induced latent transitions learned from single-cell perturbation data to patient-level cancer treatment-response prediction.
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CrossDocked2020 arxiv.org
Large-scale dataset for structure-based virtual screening.
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AlphaFold Protein Structure Database alphafold.ebi.ac.uk
3D protein structure predictions.
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10x Genomics Dataset 10xgenomics.com
Collection of single-cell datasets.
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Humanitarian OpenStreetMap Team (HOT) youtube.com
YouTube channel of the HOT containing content regarding humanitarian OSM work.
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OpenStreetMap Indonesia YouTube Channel youtube.com
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OpenStreetMap US YouTube Channel youtube.com
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State of the Map youtube.com
YouTube channel of the State of the Map conference containing VoDs of talks. (Wiki)
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OpenStreetMap Poland YouTube Channel youtube.com
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OSM Promotional Material Programme wiki.openstreetmap.org
Information on receiving promotional merch such as Stickers.
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Mapping projects wiki.openstreetmap.org
An overview of ongoing and proposed mapping initiatives.
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Main Page wiki.openstreetmap.org
An overview page with links to the most useful pages.
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Beginners' guide wiki.openstreetmap.org
Five-step-guide on what OpenStreetMap is and how it works.
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What OSM? whatosm.pavie.info
Tool for finding tools for contributing to OSM by answering three simple questions.
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OpenStreetMap Welcome Tool welcome.osm.be
Tool for finding fresh mappers in your area. (Source Code)
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weeklyOSM weeklyosm.eu
News and updates to inform the community about what is going on in the OSM Universe, from experienced mappers to new OSM members.
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Web To OSM Opening Hours webmapping.cyou
Tool for converting human-readable opening hours to opening_hours tags. (Source Code)
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Volunteer armies map 'invisible' communities hit by coronavirus web.archive.org
OpenStreetMap contributors map over 1,100 handwashing stations. (5 min read, 2020-10-15, The Asahi Shimbun)
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Visit Sights visitsights.com
Suggestions for self-guided sightseeing tours by foot and overview of individual sights all around the world.
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Vespucci vespucci.io
Advanced full-data-model editor for Android. (Android / Source Code / Wiki)
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Tracesmap tracesmap.com
A map allowing for planning routes on OsmCarto and OpenTopoMap-derived retina maps.
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OSM Inspector tools.geofabrik.de
The OSM Inspector (alias OSMI) is a web based debugging tool for advanced OpenStreetMap users offered by Geofabrik. On a map you can see several themed views, each with several layers, showing specific details of the OSM data, often with highlighted errors.
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TeachOSM teachosm.org
Project assisting educators at all levels to introduce open source mapping and OpenStreetMap in the classroom. (Wiki)
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TeachOSM Tasking Manager tasks.teachosm.org
Tasking Manager made for school classrooms to help map for humanitarian causes.
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taginfo taginfo.openstreetmap.org
Website displaying information on tags and their usage. (Source Code / Wiki)
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Potlatch 3 systemed.net
Native intermediate-level editor built in Adobe AIR. (Source Code / Wiki)
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Straßenraumkarte Neukölln supaplexosm.github.io
High-detail micromap of the district "Neukölln" of Berlin, Germany. (Wiki)
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OSM Streak streak.osmz.ru
Helps you do small tasks for OSM every day. Tasks are small and about five minutes each, but the point is to map every day, not map as much as you can. (Source Code)
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Sophox sophox.org
SPARQL API for OSM data. (Wiki)
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