CLAMP
paper - A natural language processing toolkit intended for use with the text in clinical reports. Check out their live demo first to see what it does. Usable at no cost for academic research.
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- Biomedical Information Extraction
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- 2026-10-10
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CLASP github.com
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PubTator Central ncbi.nlm.nih.gov
paper - A web platform that identifies five different types of biomedical concepts in PubMed articles and PubMed Central full texts. The full annotation sets are downloadable (see Annotated Text Data below).
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clamp github.com
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CLPM clpm.dev
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CRAFT github.com
paper - 67 full-text biomedical articles annotated in a variety of ways, including for concepts and coreferences. Now on version 5, including annotations linking concepts to the MONDO disease ontology.
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MedTator ohnlp.github.io
paper - code - An annotation tool designed to have minimal dependencies.
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