dogear

enter for all results · esc to close

Caduceus

github.comtool

Bidirectional equivariant long-range DNA sequence model based on Mamba.

visit github.com ↗
0
sign in to dogear this
from
Computational Biology
added
2026-10-10
likes
0

similar

  1. DNABERT github.com
    tool category #computational-biology link ↗

    Pre-trained bidirectional encoder for DNA sequence analysis.

  2. HyenaDNA github.com
    tool category #computational-biology link ↗

    Long-range genomic foundation model handling sequences up to 1M tokens with sub-quadratic attention.

  3. Evo github.com
    tool category #computational-biology link ↗

    Long-context genomic foundation model (up to 1M tokens).

  4. Nucleotide Transformer github.com
    tool category #computational-biology link ↗

    Foundation model for genomic sequences across multiple species.

  5. MMseqs2 github.com
    tool category #bioinformatics link ↗
  6. AlphaGenome github.com
    tool category #computational-biology link ↗

    Long-context DNA model predicting multimodal regulatory outputs including expression, splicing, chromatin features, and contact maps at near base-pair resolution.

Computational Biology › Machine Learning Tasks and Models > Foundation Models > Genomics Foundation Models: “Bidirectional equivariant long-range DNA sequence model based on Mamba.”