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OmicsFM

github.comtool

Modality-agnostic molecular-expression foundation model with matched proteomics, bulk-transcriptomics, and single-cell-transcriptomics checkpoints.

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Computational Biology
added
2026-10-10
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similar

  1. MOFA+ github.com

    Multi-Omics Factor Analysis framework identifying shared axes of variation across bulk and single-cell datasets including RNA, ATAC, proteomics, methylation, and copy number.

  2. CellFM github.com

    800M-parameter single-cell foundation model pretrained on transcriptomics from 100 million human cells for annotation, integration, gene-function, and perturbation tasks.

  3. Gene Expression Omnibus ncbi.nlm.nih.gov

    Public functional genomics database.

  4. scFoundation github.com

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  5. BulkFormer github.com

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  6. BioMaster github.com

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Computational Biology › Machine Learning Tasks and Models > Foundation Models > Other Omics Foundation Models: “Modality-agnostic molecular-expression foundation model with matched proteomics, bulk-transcriptomics, and single-cell-transcriptomics checkpoints.”