Trackpy

soft-matter.github.iosite

Fast and Flexible Particle-Tracking Toolkit.

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Biological Image Analysis

added

2026-10-10

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1. ▲
   TrackMate github.com

   tool category #biological-image-analysis link ↗

   User-friendly interface that allows for performing tracking, data visualization, editing results and track analysis in a convenient way.

   
2. ▲
   TrackMateR github.com

   tool category #biological-image-analysis link ↗

   R package to analyze cell migration and particle tracking experiments using outputs from TrackMate.

   
3. ▲
   TracX gitlab.com

   site category #biological-image-analysis link ↗

   MATLAB generic toolbox for cell tracking from various microscopy image modalities such as Bright-field (BF), phase contrast (PhC) or fluorescence (FL) with an automated track quality assessment in absence of a ground truth.

   
4. ▲
   SegTrack v2 web.engr.oregonstate.edu

   site category #computer-vision link ↗
5. ▲
   DetectAndTrack github.com

   tool category #robotic-tooling link ↗

   Detect-and-Track: Efficient Pose.

   
6. ▲
   Modular Tracking Framework webdocs.cs.ualberta.ca

   site category #computer-vision link ↗

Biological Image Analysis › Cell migration and particle tracking: “Fast and Flexible Particle-Tracking Toolkit.”