dogear

enter for all results · esc to close

CompactionAnalyzer

github.comtool

Python package to quantify the tissue compaction (as a measure of the contractile strength) generated by cells or multicellular spheroids that are embedded in fiber materials.

visit github.com ↗
0
sign in to dogear this
from
Biological Image Analysis
added
2026-10-10
likes
0

similar

  1. CaImAn github.com
    tool category #neuroscience link ↗

    Computational toolbox for large scale Calcium Imaging Analysis.

  2. CellProfiler github.com
    tool category #biological-image-analysis link ↗

    Open-source software helping biologists turn images into cell measurements.

  3. Pycytominer github.com
    tool category #biological-image-analysis link ↗

    Data processing functions for profiling perturbations.

  4. Quanfima github.com
    tool category #biological-image-analysis link ↗

    Quantitative Analysis of Fibrous Materials: A collection of useful functions for morphological analysis and visualization of 2D/3D data from various areas of material science.

  5. QuimP github.com
    tool category #biological-image-analysis link ↗

    Software for tracking cellular shape changes and dynamic distributions of fluorescent reporters at the cell membrane.

  6. htsimaging github.com
    tool category #biological-image-analysis link ↗

    Python package for high-throughput single-cell imaging analysis.

Biological Image Analysis › Other: “Python package to quantify the tissue compaction (as a measure of the contractile strength) generated by cells or multicellular spheroids that are embedded in fiber materials.”