TissUUmaps tissuumaps.research.it.uu.se

Interactive visualization of large-scale spatial gene expression and tissue morphology data.

TISCH tisch.comp-genomics.org

Tumor Immune Single-cell Hub (TISCH) is a scRNA-seq database focusing on tumor microenvironment.

Giotto Viewer spatialgiotto.rc.fas.harvard.edu

A web-based visualization package for spatial transcriptomic data.

MORPHEUS software.broadinstitute.org

Versatile matrix visualization and analysis software.

Single Cell VR singlecellvr.herokuapp.com

Interactive visualization of single-cell data in virtual reality.

Signal signal.mutationalsignatures.com

Mutational signatures extracted from cancer samples and isogenic cell-based experiments.

SieveSifter sieve.fredhutch.org

Tool for visualizing the sieve analyses of HIV-1 vaccine efficacy trials.

TADkit sgt.cnag.cat

3D genome browser and TADbit front-end.

SCope scope.aertslab.org

A visualization tool for large-scale scRNA-seq datasets.

EzMol sbg.bio.ic.ac.uk

Visualisation and image production of protein and nucleic acid structures.

Malaria Cell Atlas sanger.ac.uk

Explore how genes are expressed across more than 500 individual Plasmodium parasites.

Life Expectancy projects.flowingdata.com

Life expectancies around the world, 1960 to 2009.

Archaeopteryx phyloxml.org

Visualization, analysis, and editing of phylogenetic trees.

PhyD3 phyd3.bits.vib.be

A phylogenetic tree viewer.

pdb2print pdb2print.org

Convert a PDB structure into a 3D-printable 3MF file, with one object per chain, magnet pockets and custom display stands.

Oncoscape oncoscape.sttrcancer.org

An integrated suite of analysis tools for users to explore hypotheses related to molecular and clinical data.

Nextstrain nextstrain.org

Real-time tracking of virus evolution.

Mouse Brain Atlas mousebrain.org

Atlas of cell types from the Linnarsson Lab.

Metaviz metaviz.cbcb.umd.edu

Interactive statistical and visual analysis of metagenomic data.

Metaspace metaspace2020.eu

A platform for metabolite annotation of imaging mass spectrometry data.

GIVe mcf7.givengine.org

Epigenome and genome interaction.

iSEE marionilab.cruk.cam.ac.uk

The Interactive SummarizedExperiment Explorer.

MAGI magi.brown.edu

Visualization and collaborative annotation of genomic aberrations.

Clustergrammer CCLE Explorer maayanlab.github.io

Browse relative mRNA expression data for cancer cell lines from the Cancer Cell Line Encyclopedia (CCLE) by tissue of origin using Clustergrammer.

Clustergrammer maayanlab.cloud

Visualize high-dimensional data as interactive hierarchically clustered heatmaps.

Loom Viewer loom.linnarssonlab.org

Tool for sharing, browsing and visualizing single-cell data stored in the Loom file format.

SPRING kleintools.hms.harvard.edu

A tool for uncovering high-dimensional structure in single-cell gene expression data.

cellxgene kidneycellatlas.org

An interactive explorer for single-cell transcriptomics data.

START kcvi.shinyapps.io

Shiny Transcriptome Analysis Resource Tool allows users to visualize RNA-seq data starting with count data.

Brain mRNA Isoform Atlas isoformatlas.com

Visualize cell type signatures of alternative splicing in postnatal development.

IONpath MIBItracker ionpath.com

Slide and image data.

Snake Oil Supplements informationisbeautiful.net

Scientific evidence for popular health supplements.

IMP: Integrative Multi-species Prediction imp.princeton.edu

Analyze your experimental results in the functional context of gene-gene networks from multiple organisms.

HiPiler hipiler.higlass.io

A tool for visually exploring and aggregating reoccurring patterns (like loops, TADs, etc.) in Hi-C maps.

HiGlass higlass.io

A tool for exploring genomic contact matrices and tracks.

neuroglancer hemibrain-dot-neuroglancer-demo.appspot.com

Tool for visualization of highly detailed maps of neuronal connectivity in the fly brain.

Institute for Health Metrics and Evaluation healthdata.org

Visualizations of disease worldwide.

Gosling gosling.js.org

A grammar-based toolkit for scalable and interactive genomics data visualization.

GeneMANIA genemania.org

Helps predict the function of genes and gene sets.

Genomics 2 Proteins portal g2p.broadinstitute.org

A platform for connecting genomic data to protein sequence and protein structure.

FlyWire flywire.ai

A human-AI collaboration to map the fly connectome.

gbatlas fishka.bio

Interactive viewer for GenBank/GenPept records: linear and circular feature maps, CDS translation, ORF and restriction-site layers, entirely in the browser.

iCoMut Beta for FireBrowse firebrowse.org

Interactive exploration of mutation rates, mutation signatures, clinical data, gene mutations.

ExploSig explosig.lrgr.io

Interactive visualization of mutational signatures and clinical data.

Epiviz epiviz.cbcb.umd.edu

Interactive visual analytics for functional genomics data.

WashU Epigenome Browser epigenomegateway.wustl.edu

Displays many sequencing-based data sets across all or part of the genome, on specific gene sets or pathways, and in the context of their metadata.

Race, Gender, and Age in TCGA enpicom.com

An interactive visualization of patient gender, race, and age in The Cancer Genome Atlas (TCGA) dataset.

Mutaframe deogen2.mutaframe.com

Visualize variants of the human genome.

Delta delta.big.ac.cn

An integrative analysis and visualization platform for 3D genome.

Cytosplore cytosplore.org

Cytosplore is an interactive visual analysis system for the analysis of mass cytometry data.